This list omits the fact that I explicitly soundtrack damn near everything, using a mix of things that will work with particular scenes. It also leaves out soundtracks for anything, as they are not "shadowrun music" per se, but are "soundtracks also useful for shadowrun".
I will back up Chrysalis' style, but not cover the albums she already has, since there's some crossover. My top 10:
1) Gridlock - Further. Not everybody's cup of tea, but probably one of my favorite albums of all time. Hell, ANY Gridlock album.
2) Skinny Puppy - Last Rites.
3) Decoded Feedback - Shockwave.
4) Tarmvred - SubFusC
5) GZA - Legend of the Liquid Sword. It doesn't fit with the rest of the industrial or thrashy stuff, but it has always very much struck me as appropriate.
6) VNV Nation - Empires.
7) Void Construct - Estramay Aleph

Big Black - Songs About Fucking. Still a classic, 22 years later.
9) Machines of Loving Grace - Gilt
10) The Future Sound of London - Dead Cities