I may be inferring too much from the info about armor penetration, AP, but from page 152, "others are designed to tear armor..."
Probably am inferring too much because now I see you could raise your armor value by shooting it with a Slivergun or flechette ammo.
I like my mistaken idea better. If you need to do the math any way, you may as well apply the damage permanently. Seems more realistic. It also gives a reason to plink away and reduce their armor to where your shots will do physical damage.
Let's implement it as erratta.